Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008429.1 Corchorus capsularis cultivar CVL-1 contig08450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29571

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3860--3888
2
14.5
2
100
0
58
48
0
0
51
1.00
4708--4745
11
3.5
11
89
10
51
39
0
2
57
1.12
4847--4980
66
2.0
66
100
0
268
41
11
23
23
1.88
6592--6640
23
2.1
23
85
7
64
48
8
12
30
1.69
7220--7704
166
2.9
165
81
3
594
29
15
17
38
1.90
9764--9805
19
2.3
19
92
8
70
16
9
21
52
1.72
23312--23393
27
2.9
28
85
5
103
15
21
24
37
1.93
26101--26446
51
6.8
52
74
3
280
42
4
15
38
1.66
26101--26446
101
3.4
101
89
0
512
42
4
15
38
1.66
27096--27336
56
4.2
56
87
5
317
51
7
16
24
1.70
27096--27336
111
2.1
115
88
5
357
51
7
16
24
1.70
27522--27936
22
18.7
22
71
14
250
55
6
19
17
1.64
27554--27915
43
8.1
43
76
11
275
56
6
19
17
1.62
27796--27849
15
3.7
15
73
9
58
57
5
20
16
1.59

Tables:   1

The End!