Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008431.1 Corchorus capsularis cultivar CVL-1 contig08452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21731

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1932--2023
8
11.5
8
79
11
73
80
3
16
0
0.84
1961--2022
4
14.8
4
93
6
81
77
0
22
0
0.77
1935--2024
5
19.0
5
88
6
77
78
3
17
0
0.88
3926--3976
17
3.2
17
68
21
56
29
11
15
43
1.82
6457--6495
9
4.4
9
90
3
53
76
0
0
23
0.78
6468--6493
3
8.7
3
100
0
52
69
0
0
30
0.89
11616--11659
21
2.1
21
87
8
63
22
29
11
36
1.89
14577--14615
19
2.1
19
90
0
60
43
0
41
15
1.46
16370--16703
109
3.1
109
94
2
564
29
11
20
39
1.87
16853--16928
39
2.0
36
85
7
98
15
11
38
34
1.84
17772--17828
22
2.8
21
74
20
57
43
3
19
33
1.68
17779--17816
19
2.1
18
90
5
58
44
2
21
31
1.66
21056--21726
35
19.7
34
83
10
792
39
10
17
31
1.85

Tables:   1

The End!