Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008432.1 Corchorus capsularis cultivar CVL-1 contig08453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17833

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
140--255
59
2.0
59
89
0
178
31
15
13
38
1.87
1475--1507
11
3.0
11
91
8
50
54
3
0
42
1.15
3827--3864
2
19.0
2
100
0
76
50
0
0
50
1.00
4377--4407
2
15.5
2
100
0
62
48
0
0
51
1.00
6663--6697
17
2.1
17
94
0
61
25
5
17
51
1.67
6715--6767
27
2.0
27
92
0
88
18
22
24
33
1.97
7024--7094
37
1.9
37
91
0
115
36
9
14
39
1.79
7336--7382
5
9.8
5
81
9
62
19
21
0
59
1.38
7468--7493
13
2.0
13
100
0
52
15
7
7
69
1.35
7838--7865
2
14.0
2
100
0
56
50
0
0
50
1.00
12399--12500
12
8.6
12
84
10
129
26
24
8
40
1.84
13953--13985
15
2.1
16
88
5
50
51
6
15
27
1.66
16074--16100
6
4.5
6
100
0
54
55
14
0
29
1.40
16097--16141
13
3.5
13
87
3
65
57
8
11
22
1.60
16097--16149
25
2.1
25
86
6
72
60
9
9
20
1.55

Tables:   1

The End!