Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008436.1 Corchorus capsularis cultivar CVL-1 contig08457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34539

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2393--2461
26
2.5
26
83
6
75
37
13
1
47
1.51
5023--5236
107
2.0
107
100
0
428
33
21
16
28
1.95
5890--6056
90
1.8
91
93
1
291
35
15
11
37
1.84
10714--10791
26
2.8
27
86
11
104
25
25
14
34
1.94
10737--10791
26
2.1
26
100
0
110
21
21
18
38
1.94
22232--22261
15
2.0
15
93
0
51
43
26
10
20
1.83
27668--27697
15
2.0
15
93
0
51
46
23
10
20
1.80
30561--30591
15
2.1
15
100
0
62
32
12
19
35
1.90

Tables:   1

The End!