Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008437.1 Corchorus capsularis cultivar CVL-1 contig08458, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47818

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16581--16659
29
2.6
30
80
9
81
34
13
12
39
1.83
22072--22103
1
32.0
1
100
0
64
0
0
0
100
0.00
24590--24636
22
2.0
24
84
8
62
36
6
12
44
1.68
27028--27092
21
3.1
21
82
2
78
64
6
13
15
1.47
32860--32929
31
2.3
31
89
0
104
32
27
21
18
1.97
34379--34468
41
2.2
41
100
0
180
36
11
6
45
1.66

Tables:   1

The End!