Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008439.1 Corchorus capsularis cultivar CVL-1 contig08460, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17500

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4314--4351
16
2.4
16
100
0
76
26
0
23
50
1.50
5639--5674
19
1.9
18
88
5
54
41
2
22
33
1.68
8243--8305
30
2.1
30
91
5
101
19
34
15
30
1.93
10530--10572
21
2.0
21
86
0
59
32
23
18
25
1.97
10797--10966
4
45.0
4
69
13
51
64
1
10
23
1.35
10761--10894
27
5.2
26
71
17
93
59
1
13
25
1.43
10749--10869
51
2.4
50
82
10
138
59
1
13
25
1.43
10847--10924
15
5.3
15
75
7
63
64
1
8
25
1.31
10968--10998
14
2.3
14
94
5
55
64
6
0
29
1.18
13070--13245
97
1.8
96
83
3
237
28
26
21
23
1.99
16841--16874
13
2.6
13
95
0
59
23
8
8
58
1.56
16871--16897
6
4.5
6
100
0
54
29
0
14
55
1.40

Tables:   1

The End!