Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008451.1 Corchorus capsularis cultivar CVL-1 contig08472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11849

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
386--457
25
2.8
24
78
15
65
45
1
1
51
1.18
1115--1171
8
6.6
8
75
13
51
50
0
0
49
1.00
1117--1168
27
1.9
27
88
0
77
51
0
0
48
1.00
4786--4870
22
3.8
22
73
3
80
36
8
14
41
1.75
4789--4894
22
4.7
23
72
10
78
37
8
13
40
1.75
4856--4915
22
2.7
22
92
0
93
36
11
13
38
1.81
4789--4915
44
2.9
44
78
3
121
36
9
14
40
1.78
5087--5121
11
3.3
11
92
4
54
2
31
0
65
1.07
7246--7293
24
2.0
24
91
0
78
45
8
27
18
1.78

Tables:   1

The End!