Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008462.1 Corchorus capsularis cultivar CVL-1 contig08483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22293

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
124--148
13
1.9
13
100
0
50
0
0
8
92
0.40
164--261
33
3.0
31
76
10
97
15
29
42
12
1.83
268--378
33
3.4
33
73
17
88
11
39
34
14
1.82
434--516
33
2.6
33
86
3
116
10
28
44
15
1.80
714--749
18
1.9
19
88
5
56
83
0
16
0
0.65
3194--3231
14
2.7
14
100
0
76
31
15
7
44
1.75
12199--12234
13
2.8
13
86
0
54
19
41
8
30
1.81
12805--12886
41
2.0
41
90
0
128
28
12
18
41
1.86
14767--14814
25
1.9
25
82
0
60
29
22
20
27
1.99
18108--18140
2
16.5
2
100
0
66
48
0
0
51
1.00
21484--21540
27
2.4
22
75
25
69
35
3
14
47
1.61

Tables:   1

The End!