Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008469.1 Corchorus capsularis cultivar CVL-1 contig08490, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21547

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
315--349
17
2.0
18
88
5
54
62
17
8
11
1.52
3354--3493
33
4.2
32
79
7
111
10
27
41
20
1.85
3473--3514
21
2.0
21
95
0
75
16
33
30
19
1.94
5247--5395
33
4.6
33
85
2
187
39
17
11
31
1.85
5411--5475
33
2.0
33
90
0
103
46
20
6
27
1.74
7909--8048
33
4.2
32
81
7
113
9
26
42
22
1.83
8028--8069
21
2.0
21
95
0
75
16
33
30
19
1.94

Tables:   1

The End!