Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008475.1 Corchorus capsularis cultivar CVL-1 contig08496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17705

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2452--2483
15
2.1
15
94
0
55
37
21
6
34
1.79
5847--5912
28
2.4
29
82
10
84
37
21
10
30
1.87
6283--6328
13
3.5
13
88
8
67
13
6
19
60
1.54
7843--7878
2
18.0
2
100
0
72
50
0
0
50
1.00
8469--8502
12
2.8
12
83
16
52
26
23
5
44
1.76
10351--10413
33
1.9
32
83
3
81
30
33
7
28
1.86
10600--10659
20
3.1
19
69
7
57
36
10
25
28
1.88
11582--11778
41
4.9
40
86
5
263
36
6
25
31
1.82
11582--11786
80
2.5
80
84
5
270
36
7
25
31
1.83
11695--11763
20
3.5
19
68
5
57
40
2
20
36
1.67
12722--12754
17
1.9
17
88
11
50
60
0
0
39
0.97
12958--12988
15
2.0
16
93
6
55
35
6
0
58
1.24
16898--16949
16
3.3
16
92
7
81
9
13
40
36
1.77
17268--17298
2
15.0
2
93
6
53
48
0
3
48
1.17

Tables:   1

The End!