Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008476.1 Corchorus capsularis cultivar CVL-1 contig08497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13727

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
560--634
31
2.4
31
82
6
89
6
10
40
42
1.66
560--635
16
4.8
16
80
3
73
7
10
39
42
1.69
7598--7622
6
4.2
6
100
0
50
48
36
0
16
1.46
7626--8003
38
9.9
38
92
1
569
23
36
17
22
1.95
7626--8003
77
4.9
77
90
2
584
23
36
17
22
1.95
7626--8003
115
3.3
115
91
1
600
23
36
17
22
1.95
8112--8152
20
2.0
20
90
0
64
56
24
0
19
1.42
13462--13491
13
2.4
13
94
5
53
86
6
6
0
0.70

Tables:   1

The End!