Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008482.1 Corchorus capsularis cultivar CVL-1 contig08503, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35019

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6344--6386
21
2.0
21
100
0
86
25
23
23
27
2.00
7291--7355
33
2.0
33
96
3
123
15
33
29
21
1.94
9182--9251
3
23.0
3
81
18
83
61
0
0
38
0.96
9182--9251
16
4.6
15
78
21
83
61
0
0
38
0.96
12060--12314
125
2.0
126
88
2
377
25
12
16
45
1.83
27514--27549
13
2.6
14
86
4
56
0
16
0
83
0.65
27779--27811
6
5.5
6
100
0
66
66
0
18
15
1.25
28712--33656
321
15.4
321
83
7
5948
36
16
14
32
1.89
31491--33656
324
6.7
322
85
3
2913
37
16
14
32
1.88
34460--34670
50
4.2
50
87
6
302
32
26
35
6
1.81
34532--34921
55
7.0
55
77
10
389
32
23
36
6
1.81
34601--34730
67
1.9
67
95
0
233
34
24
36
4
1.76
34580--34895
110
2.7
118
84
9
450
32
23
37
6
1.80
34460--34921
165
2.8
162
83
12
583
33
24
36
6
1.81
34668--34972
110
2.8
109
85
5
312
35
22
34
7
1.83

Tables:   1

The End!