Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008485.1 Corchorus capsularis cultivar CVL-1 contig08506, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45026

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102--135
2
17.0
2
100
0
68
50
0
0
50
1.00
1081--1112
3
10.7
3
100
0
64
34
0
0
65
0.93
10541--10569
2
14.5
2
100
0
58
48
0
0
51
1.00
14309--14344
6
6.0
6
100
0
72
0
0
33
66
0.92
15113--15137
7
3.6
7
100
0
50
12
44
0
44
1.41
17639--17668
2
15.0
2
100
0
60
50
0
0
50
1.00
18809--18833
2
12.5
2
100
0
50
48
0
0
52
1.00
22605--22631
14
1.9
14
100
0
54
33
0
44
22
1.53
25896--26027
65
2.0
66
94
1
230
33
13
22
30
1.93
29610--29649
8
5.1
8
93
6
73
50
12
25
12
1.75
31844--31871
12
2.3
12
100
0
56
75
7
0
17
1.03
32114--32144
6
5.2
6
100
0
62
48
35
0
16
1.46
37107--37136
2
15.0
2
100
0
60
50
0
0
50
1.00
40075--40108
7
5.1
7
96
3
54
14
32
0
52
1.42
43244--43335
46
2.0
46
95
0
166
31
27
7
33
1.85

Tables:   1

The End!