Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008492.1 Corchorus capsularis cultivar CVL-1 contig08513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16639

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1982--2012
12
2.6
12
94
0
53
87
3
9
0
0.66
2277--2306
2
15.0
2
92
0
51
46
0
0
53
1.00
4281--4344
28
2.3
28
86
5
85
7
34
6
51
1.56
7581--7613
17
1.9
17
88
11
50
18
12
3
66
1.36
14166--14194
13
2.2
13
100
0
58
17
31
0
51
1.45
16410--16639
7
34.9
7
90
8
303
15
0
46
38
1.46
16417--16633
6
33.3
6
91
8
281
15
0
46
38
1.46
16409--16633
13
17.2
13
87
11
295
15
0
46
38
1.46

Tables:   1

The End!