Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008494.1 Corchorus capsularis cultivar CVL-1 contig08515, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43424

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63--113
25
2.0
25
82
14
61
37
1
5
54
1.36
4208--4242
3
11.7
3
100
0
70
31
0
0
68
0.90
12479--12514
19
1.9
18
88
5
54
33
22
2
41
1.68
13459--13500
18
2.2
18
87
8
57
11
0
16
71
1.14
25063--25122
21
2.9
21
71
0
66
35
10
21
33
1.87
26565--26611
13
3.8
12
78
13
51
40
0
4
55
1.19

Tables:   1

The End!