Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008506.1 Corchorus capsularis cultivar CVL-1 contig08527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3592

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
753--817
32
2.0
32
100
0
130
41
27
9
21
1.83
2577--2749
71
2.4
71
89
0
256
45
8
23
23
1.80
2767--3015
41
6.1
40
84
4
275
40
11
21
26
1.87
2769--3017
123
2.0
124
83
3
315
40
11
20
27
1.87
2778--3017
82
2.9
82
87
4
306
40
11
21
26
1.87
3026--3468
37
11.9
37
74
14
310
44
10
19
25
1.83
3026--3468
36
11.9
36
75
15
298
44
10
19
25
1.83
3026--3457
107
3.9
106
72
16
295
43
10
19
25
1.83

Tables:   1

The End!