Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008511.1 Corchorus capsularis cultivar CVL-1 contig08532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54752

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14865--14926
29
2.1
30
82
8
74
19
16
12
51
1.76
15066--15138
30
2.5
29
81
2
83
39
13
26
20
1.90
15071--15138
29
2.3
30
82
2
84
42
14
20
22
1.88
19288--19431
77
1.9
77
100
0
288
45
17
7
29
1.76
30589--30716
44
2.9
44
95
0
229
25
23
9
41
1.84
32763--32792
15
2.0
15
100
0
60
46
26
6
20
1.75
40666--40800
44
3.1
44
89
0
207
25
24
8
41
1.83
41590--41714
63
2.0
63
82
3
153
18
23
16
42
1.89
43623--43750
44
2.9
44
95
0
229
25
23
9
41
1.84
46601--46719
44
2.7
44
89
0
175
28
22
10
38
1.87
47764--48345
291
2.0
291
96
0
1083
43
15
14
25
1.86

Tables:   1

The End!