Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008515.1 Corchorus capsularis cultivar CVL-1 contig08536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35721

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2025--2062
18
2.2
17
86
13
51
60
7
23
7
1.51
8615--8690
29
2.7
29
71
20
79
69
3
10
15
1.31
19549--19578
15
2.0
15
93
0
51
23
13
16
46
1.82
21202--21244
2
21.5
2
100
0
86
0
0
48
51
1.00
22221--22365
49
2.9
50
90
3
231
40
14
8
37
1.76
27050--27088
2
20.0
2
89
5
62
51
2
0
46
1.14
27212--27265
6
8.7
6
88
8
72
29
1
3
64
1.21
28244--28268
2
12.5
2
100
0
50
52
0
0
48
1.00
31848--31900
27
2.0
27
88
0
79
35
3
33
26
1.75
32770--32872
45
2.3
45
83
6
120
28
12
16
42
1.84
33052--33083
6
5.5
6
96
3
57
65
0
0
34
0.93

Tables:   1

The End!