Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008524.1 Corchorus capsularis cultivar CVL-1 contig08545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2414

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
820--861
22
1.9
22
100
0
84
52
9
19
19
1.72
862--1096
92
2.6
92
100
0
470
38
16
19
25
1.92
1384--1468
2
39.5
2
78
21
84
44
4
4
45
1.45
1398--1462
25
2.6
25
97
2
121
43
6
6
44
1.54
1723--1809
16
5.5
16
77
8
88
8
10
37
43
1.68
1712--1830
47
2.5
47
81
8
143
8
13
39
38
1.75
1802--1855
23
2.4
23
87
3
74
5
24
42
27
1.76

Tables:   1

The End!