Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008528.1 Corchorus capsularis cultivar CVL-1 contig08549, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2075

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
246--284
20
2.0
20
89
0
60
33
15
15
35
1.89
281--641
51
7.2
51
74
8
258
42
5
16
35
1.72
270--614
102
3.4
102
93
2
570
42
5
16
34
1.72
270--677
51
8.1
51
74
7
201
42
6
15
35
1.72
1281--1484
47
4.3
47
91
1
302
47
9
20
23
1.79
1445--1600
71
2.2
70
80
8
174
50
8
15
25
1.73
1516--1581
31
2.1
31
88
8
98
48
7
18
25
1.74
1699--1747
21
2.3
22
82
10
66
61
2
20
16
1.44
1840--1893
22
2.5
21
87
3
72
50
5
20
24
1.69
1874--1929
15
3.9
15
76
9
62
57
5
19
17
1.59
1849--1995
22
6.4
23
72
19
101
55
6
19
19
1.65

Tables:   1

The End!