Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008529.1 Corchorus capsularis cultivar CVL-1 contig08550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11764

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7216--7249
2
17.0
2
100
0
68
50
0
0
50
1.00
7353--7425
31
2.4
31
93
2
121
24
43
24
6
1.78
7437--7464
10
2.8
10
100
0
56
82
0
0
17
0.68
8338--8372
16
2.2
16
89
0
52
37
37
5
20
1.76
9074--9150
31
2.5
31
84
0
109
37
18
11
32
1.87
9289--9387
31
3.3
29
74
17
78
33
10
23
33
1.88
10305--10344
20
2.0
20
95
0
71
37
5
17
40
1.72
10995--11057
19
3.4
18
75
14
58
46
1
1
50
1.20

Tables:   1

The End!