Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000853.1 Corchorus capsularis cultivar CVL-1 contig00853, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19397

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--371
22
16.5
22
69
16
171
36
10
16
37
1.83
89--192
23
4.6
23
82
5
106
38
9
13
38
1.77
68--192
46
2.8
45
80
7
132
37
9
15
37
1.80
242--330
45
2.0
45
84
4
117
32
11
16
39
1.84
353--401
22
2.2
22
85
7
64
53
2
14
30
1.52
429--580
62
2.5
62
92
0
250
42
9
13
34
1.77
5257--5313
28
2.0
28
100
0
114
42
3
14
40
1.62
12945--12970
8
3.2
8
100
0
52
50
0
11
38
1.39
19369--19397
2
14.5
2
100
0
58
51
0
48
0
1.00

Tables:   1

The End!