Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008531.1 Corchorus capsularis cultivar CVL-1 contig08552, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7795

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4919--4952
16
2.2
16
89
5
52
58
8
2
29
1.43
6236--6271
19
1.9
18
88
5
54
33
22
2
41
1.68
7406--7470
22
3.1
22
82
8
82
41
12
16
29
1.85
7417--7473
20
2.8
20
84
12
80
42
14
17
26
1.87
7481--7558
22
3.6
21
77
5
84
38
11
11
38
1.78

Tables:   1

The End!