Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008541.1 Corchorus capsularis cultivar CVL-1 contig08562, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41041

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1943--2758
49
16.7
49
87
3
1092
23
32
13
30
1.93
15706--15745
10
3.8
11
83
9
57
20
7
45
27
1.78
15573--15870
159
1.9
159
99
0
587
16
21
32
28
1.96
20949--21274
106
3.1
106
88
0
501
25
15
20
38
1.92
21565--21591
2
13.5
2
100
0
54
51
0
0
48
1.00
30445--30505
29
2.1
30
87
3
88
42
3
3
50
1.34
31200--31284
31
2.8
31
80
7
111
30
8
20
41
1.81
35885--35926
8
5.5
8
77
11
52
52
14
0
33
1.42
39085--39154
30
2.4
29
86
9
99
35
12
10
41
1.77

Tables:   1

The End!