Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008545.1 Corchorus capsularis cultivar CVL-1 contig08566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8468

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1636--1754
36
3.4
35
78
17
140
28
16
7
47
1.74
1657--1769
32
3.4
32
76
17
122
28
18
6
46
1.73
1768--2249
35
13.7
33
81
8
462
25
21
9
42
1.84
1753--2253
141
3.5
138
86
5
626
25
21
9
43
1.83
2244--2315
11
6.5
11
81
1
90
13
26
9
50
1.73
2244--2321
22
3.5
22
89
1
102
15
25
8
50
1.73
2264--2321
11
5.2
11
76
12
55
17
24
8
50
1.74
2380--2480
36
2.8
36
87
1
139
28
13
9
47
1.75
2450--2530
41
2.0
42
90
2
128
23
20
9
45
1.81
2549--2745
36
5.7
35
78
8
190
26
19
8
45
1.78

Tables:   1

The End!