Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008548.1 Corchorus capsularis cultivar CVL-1 contig08569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31809

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5108--5145
18
2.1
18
100
0
76
44
23
10
21
1.83
7559--7661
52
2.0
52
84
0
134
23
24
23
29
1.99
19577--19817
41
5.7
41
76
6
223
24
12
26
36
1.91
19554--19817
84
3.1
84
84
3
359
25
12
26
36
1.91
19555--19817
43
6.2
41
73
10
199
25
12
25
36
1.91
21856--21953
6
16.8
6
69
14
53
34
1
11
53
1.44
23041--23926
443
2.0
444
92
1
1492
46
11
23
17
1.82
24968--25023
28
2.0
28
92
0
94
30
23
17
28
1.97
27833--27870
20
1.9
20
88
0
58
36
15
5
42
1.70

Tables:   1

The End!