Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008549.1 Corchorus capsularis cultivar CVL-1 contig08570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27492

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
555--588
7
4.9
7
100
0
68
58
0
41
0
0.98
642--713
14
5.2
13
77
14
56
54
0
1
44
1.08
654--693
3
14.0
3
84
10
57
62
0
0
37
0.95
4343--4383
21
2.0
21
90
0
64
36
9
21
31
1.86
10740--10780
21
2.0
21
85
0
55
39
9
21
29
1.86
16455--16901
67
6.7
67
82
6
471
21
17
16
44
1.86
16465--16900
132
3.3
130
81
7
468
22
16
16
44
1.86
17494--17538
13
3.5
13
90
3
74
55
8
13
22
1.65
17494--17546
25
2.1
25
89
6
81
58
9
11
20
1.60
24176--24709
22
24.4
22
85
1
581
24
24
24
26
2.00

Tables:   1

The End!