Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008551.1 Corchorus capsularis cultivar CVL-1 contig08572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12072

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
962--1053
45
2.0
45
100
0
184
39
8
20
31
1.83
1422--1491
27
2.6
27
81
0
86
48
22
11
17
1.79
1767--1970
59
3.5
59
92
0
311
25
27
14
33
1.94
3298--3330
6
5.7
6
85
7
50
0
18
0
81
0.68
3290--3345
27
2.0
28
86
10
80
0
19
3
76
0.93
3919--3962
7
6.1
7
82
15
54
0
20
0
79
0.73
3915--3962
22
2.1
22
88
3
69
0
20
0
79
0.74
3919--3962
15
3.1
15
81
18
58
0
20
0
79
0.73
3919--3962
13
3.2
13
81
15
52
0
20
0
79
0.73
4589--4633
14
3.3
14
87
12
67
33
15
6
44
1.73
4588--4645
14
4.4
12
81
14
53
36
12
8
43
1.73
7323--7677
22
16.2
22
73
12
259
18
20
6
54
1.66
7356--7409
15
3.7
15
73
9
58
16
20
5
57
1.59
7862--8112
55
4.6
55
94
0
421
25
18
7
49
1.72
8108--8168
22
2.8
22
85
7
72
19
22
8
49
1.75

Tables:   1

The End!