Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008558.1 Corchorus capsularis cultivar CVL-1 contig08579, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13661

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1549--1765
110
2.0
108
90
5
341
35
10
8
46
1.68
1823--1855
17
1.9
17
93
0
57
51
3
9
36
1.49
4789--4846
21
2.8
21
81
5
73
37
10
8
43
1.70
7204--7271
35
1.9
35
87
0
100
23
25
22
29
1.99
7256--7681
124
3.5
124
83
5
544
22
26
27
23
1.99
7256--7611
117
2.9
119
86
5
482
22
26
27
23
1.99

Tables:   1

The End!