Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008564.1 Corchorus capsularis cultivar CVL-1 contig08585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64065

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11723--11754
1
32.0
1
100
0
64
0
0
0
100
0.00
18892--18955
17
3.9
17
75
8
69
59
4
3
32
1.34
18900--18960
32
1.9
32
96
0
113
59
4
3
32
1.35
19419--19452
17
1.9
18
88
5
52
50
8
0
41
1.34
26633--26696
20
3.2
20
79
16
62
54
12
7
25
1.64
26661--26715
21
2.6
21
88
0
74
50
20
9
20
1.74
31309--31335
12
2.2
12
100
0
54
37
25
0
37
1.57
51648--51750
33
3.1
32
79
5
107
44
19
8
27
1.80
56872--56912
2
20.5
2
89
0
64
48
0
2
48
1.14
57045--57178
61
2.2
61
82
5
164
35
12
15
36
1.86
57256--57284
2
14.5
2
100
0
58
51
0
0
48
1.00
61154--61456
163
1.9
163
82
6
389
31
19
16
32
1.94
63805--63850
24
1.9
24
81
0
56
52
15
10
21
1.73

Tables:   1

The End!