Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000857.1 Corchorus capsularis cultivar CVL-1 contig00857, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1219

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82--116
2
17.5
2
100
0
70
51
0
0
48
1.00
234--828
22
27.8
22
68
13
185
34
15
10
39
1.82
469--508
20
2.0
20
90
0
62
40
17
10
32
1.83
515--599
23
3.7
23
82
3
100
38
14
5
41
1.70
712--762
19
2.6
20
87
6
77
25
17
13
43
1.86
843--1113
22
12.5
22
72
9
146
33
14
9
42
1.79

Tables:   1

The End!