Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008575.1 Corchorus capsularis cultivar CVL-1 contig08596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28837

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2683--2708
11
2.4
11
100
0
52
19
0
0
80
0.71
2800--2929
33
3.9
33
93
0
206
8
30
42
19
1.81
4029--4108
38
2.1
38
100
0
160
43
0
32
23
1.54
4659--4718
30
2.0
30
100
0
120
23
0
33
43
1.54
6899--6946
24
2.0
24
91
0
78
22
20
14
41
1.89
8164--8344
93
1.9
93
85
2
247
27
22
10
40
1.86
10097--10127
10
3.1
10
95
0
53
25
19
38
16
1.92
12471--12501
2
16.0
2
93
6
55
48
0
0
51
1.00
17326--17494
63
2.6
63
90
4
259
31
10
8
49
1.68
19488--19587
48
2.1
48
98
0
191
31
11
23
35
1.89
24310--24401
48
2.0
46
85
10
127
26
8
15
50
1.73

Tables:   1

The End!