Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008583.1 Corchorus capsularis cultivar CVL-1 contig08604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24637

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3059--3121
32
2.0
32
93
3
110
22
6
9
61
1.49
4154--4517
183
2.0
181
93
1
629
29
13
6
50
1.67
6007--6139
69
2.0
66
85
5
178
20
31
6
42
1.76
6177--6228
26
2.0
26
100
0
104
30
11
30
26
1.92
15646--15679
11
3.2
10
84
15
50
29
2
17
50
1.61
17421--17506
41
2.0
43
84
10
115
25
6
3
63
1.35
20711--20779
33
2.1
33
83
5
86
15
44
27
11
1.81
21979--22016
19
2.0
19
89
0
58
50
10
2
36
1.51
22867--22900
11
3.2
10
84
15
50
29
2
17
50
1.61
24530--24607
35
2.3
33
88
4
111
33
8
8
48
1.66

Tables:   1

The End!