Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008584.1 Corchorus capsularis cultivar CVL-1 contig08605, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7328

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1324--1354
15
2.1
15
93
0
53
19
16
0
64
1.29
1362--1400
17
2.3
17
90
0
60
30
15
0
53
1.42
1356--1557
42
4.7
41
81
11
203
25
22
2
49
1.62
1379--1430
25
2.0
26
88
3
79
25
19
0
55
1.43
1362--1443
18
4.2
18
72
23
60
25
19
0
54
1.44
1364--1553
88
2.2
84
82
7
231
25
22
2
48
1.63
1471--1552
25
3.7
23
69
25
68
25
21
4
47
1.71
1494--1558
17
4.4
16
67
26
54
27
18
3
50
1.61
1511--1566
25
2.3
25
84
9
71
25
17
3
53
1.60
1848--2109
37
7.1
39
71
21
142
26
19
6
48
1.72
1931--2096
69
2.3
69
86
9
219
27
17
5
49
1.68
2056--2164
55
2.0
53
94
3
191
24
17
7
50
1.71
5510--5557
26
1.9
26
91
8
82
18
12
37
31
1.88
6916--6947
15
2.1
15
94
0
55
50
12
21
15
1.77

Tables:   1

The End!