Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008586.1 Corchorus capsularis cultivar CVL-1 contig08607, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5680

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--727
22
29.5
22
67
15
163
35
15
10
38
1.81
196--240
24
2.0
22
91
8
72
26
11
6
55
1.59
833--953
22
5.5
22
76
2
91
31
11
12
44
1.78
809--952
44
3.3
44
74
9
132
30
11
13
45
1.78
1013--1106
38
2.5
37
81
3
116
55
10
20
13
1.68
1323--1361
2
19.0
2
94
5
69
48
0
2
48
1.15
1482--2054
22
26.5
22
68
12
176
35
15
10
39
1.81
2007--2054
19
2.5
20
89
6
80
25
18
10
45
1.81
2297--2481
22
8.3
22
73
12
137
34
14
9
42
1.78
2272--2442
44
3.9
44
75
3
121
34
14
9
42
1.77
2718--2880
22
7.3
22
78
8
107
38
19
9
32
1.85
2772--2828
23
2.5
23
94
2
98
33
15
14
36
1.88
3630--3700
31
2.3
31
82
7
81
49
2
16
30
1.61
5444--5470
10
2.7
10
100
0
54
40
25
11
22
1.87

Tables:   1

The End!