Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008589.1 Corchorus capsularis cultivar CVL-1 contig08610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29045

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
791--828
20
1.9
20
84
10
51
31
5
36
26
1.79
1527--1592
29
2.3
29
89
0
96
36
25
12
25
1.91
1527--1620
29
3.3
29
79
10
95
37
26
10
25
1.89
9848--10027
93
1.9
93
87
0
261
27
21
10
40
1.86
13787--13820
11
3.2
10
84
15
50
50
17
2
29
1.61
22385--22418
11
3.2
10
84
15
50
50
17
2
29
1.61
23103--23189
45
1.9
45
97
0
165
34
8
26
31
1.85
25102--25152
20
2.7
18
80
16
59
1
3
17
76
1.03
27604--27637
16
2.2
16
89
5
52
58
8
2
29
1.43

Tables:   1

The End!