Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008591.1 Corchorus capsularis cultivar CVL-1 contig08612, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11117

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1595--1621
10
2.7
10
100
0
54
44
11
14
29
1.80
5401--5443
22
2.0
22
86
9
61
46
25
4
23
1.71
8403--8501
37
2.7
35
77
10
110
29
35
15
20
1.93
8905--9172
72
3.8
72
89
3
362
20
29
19
31
1.97
9147--9199
27
2.0
27
92
3
90
15
35
18
30
1.92
9173--9425
72
3.5
72
85
2
323
22
28
17
31
1.97
8932--9413
241
2.0
241
93
0
831
21
29
18
31
1.97

Tables:   1

The End!