Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008595.1 Corchorus capsularis cultivar CVL-1 contig08616, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1817

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1647--1706
16
3.8
16
83
12
72
78
18
3
0
0.89
1647--1706
31
1.9
32
89
3
95
78
18
3
0
0.89
1665--1718
16
3.4
16
84
0
63
79
16
3
0
0.87
1648--1718
26
2.7
25
78
8
79
80
15
4
0
0.86
1726--1802
39
2.0
40
94
2
138
40
24
10
24
1.86

Tables:   1

The End!