Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008598.1 Corchorus capsularis cultivar CVL-1 contig08619, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11103

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
560--605
23
2.0
24
95
4
85
45
10
26
17
1.81
1626--1676
16
3.2
16
74
0
57
50
7
1
39
1.42
1812--1855
14
2.9
15
80
10
54
40
11
11
36
1.77
1844--1877
15
2.3
15
90
5
52
26
20
8
44
1.81
4775--4808
16
2.1
16
89
10
52
38
0
5
55
1.24
5423--5457
8
4.4
8
89
10
54
11
25
40
22
1.88
5519--5569
25
2.0
26
88
3
77
33
5
9
50
1.59
10659--10709
25
2.0
26
88
3
77
33
5
9
50
1.59

Tables:   1

The End!