Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008599.1 Corchorus capsularis cultivar CVL-1 contig08620, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15876

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16--54
18
2.1
19
85
4
53
35
33
20
10
1.86
1759--1886
37
3.5
37
86
2
195
18
39
17
24
1.92
9910--9963
26
2.0
27
86
13
76
40
16
9
33
1.80
12693--12717
2
12.5
2
100
0
50
52
0
0
48
1.00
15203--15240
20
1.9
20
88
0
58
21
39
7
31
1.82

Tables:   1

The End!