Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008601.1 Corchorus capsularis cultivar CVL-1 contig08622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44620

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6538--6638
51
2.0
50
94
1
175
29
14
15
39
1.88
7210--7303
45
2.1
45
94
4
163
26
14
39
19
1.90
11143--11201
21
2.9
19
82
14
66
3
20
10
66
1.36
14008--14071
32
2.0
31
82
8
76
40
0
15
43
1.47
16891--16929
3
13.0
3
100
0
78
66
0
0
33
0.92
20370--20407
18
2.1
19
85
5
51
10
47
2
39
1.52
22345--22389
20
2.2
20
100
0
90
22
11
33
33
1.89
22867--23096
115
2.0
115
93
0
397
38
7
18
35
1.79
30151--30179
15
1.9
15
100
0
58
44
13
13
27
1.82
38065--38133
27
2.6
27
81
4
77
31
10
21
36
1.87
38364--38415
26
2.0
26
100
0
104
46
23
0
30
1.53
38398--38569
81
2.1
82
97
1
328
40
16
15
27
1.88
38683--38776
47
2.0
47
93
0
161
38
11
19
30
1.87

Tables:   1

The End!