Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008607.1 Corchorus capsularis cultivar CVL-1 contig08628, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9092

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1673--1719
23
2.1
22
84
4
58
74
4
2
19
1.09
6958--7225
22
12.1
22
75
8
141
36
16
8
38
1.79
6969--7201
22
10.5
23
75
5
142
34
15
9
40
1.79
6989--7244
44
5.8
44
76
7
209
34
16
8
39
1.80
7350--7495
22
6.6
22
76
6
125
35
13
9
41
1.77
7581--7698
22
5.4
21
73
14
80
35
18
8
37
1.81
7784--7935
22
7.0
21
75
9
117
37
16
11
34
1.85
7784--7935
44
3.5
43
77
8
137
37
16
11
34
1.85
7784--7936
66
2.3
67
80
8
163
37
16
11
33
1.85
8100--8137
19
2.0
20
85
15
53
63
2
5
28
1.30

Tables:   1

The End!