Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008608.1 Corchorus capsularis cultivar CVL-1 contig08629, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11840

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1353--1480
17
7.7
17
82
4
118
34
33
10
21
1.88
1364--1448
17
5.1
17
92
1
127
34
32
11
21
1.89
8414--8550
28
5.0
26
83
11
159
18
40
34
5
1.75
8414--8550
53
2.5
54
86
5
186
18
40
34
5
1.75
8414--8550
30
5.0
27
82
11
163
18
40
34
5
1.75
8532--8570
20
2.0
20
94
0
69
10
35
43
10
1.73

Tables:   1

The End!