Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008612.1 Corchorus capsularis cultivar CVL-1 contig08633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58879

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8202--8234
6
5.5
6
92
0
57
66
0
18
15
1.25
9640--9756
35
3.4
33
81
10
101
23
24
20
31
1.98
9670--9756
34
2.5
35
86
3
122
20
24
20
34
1.97
9898--9947
8
6.2
8
77
9
57
28
24
4
44
1.72
9954--10157
36
5.7
35
76
8
153
17
15
27
38
1.90
9943--10148
107
1.9
106
84
6
274
18
16
27
37
1.92
18106--18137
9
3.6
9
95
0
55
18
37
31
12
1.88
41322--41355
11
3.2
10
84
15
50
29
2
17
50
1.61
42856--42913
29
2.0
29
100
0
116
17
24
17
41
1.90
46332--46373
23
1.9
22
85
9
59
7
47
26
19
1.74
49604--49669
33
2.0
33
90
0
105
22
43
21
12
1.85
49642--49692
23
2.2
23
89
0
75
23
39
19
17
1.92
53124--53153
13
2.3
13
94
0
51
26
6
6
60
1.47
54436--54467
13
2.4
14
85
15
50
53
12
6
28
1.62
57284--57326
10
3.7
12
81
15
54
72
6
6
13
1.27
57282--57326
23
2.0
22
91
4
72
71
6
8
13
1.31

Tables:   1

The End!