Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008617.1 Corchorus capsularis cultivar CVL-1 contig08638, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19873

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8791--9283
72
6.8
72
91
1
659
31
18
27
21
1.97
8791--9283
217
2.3
216
87
2
695
31
18
27
21
1.97
9644--9773
35
3.7
35
80
3
118
26
18
30
24
1.98
14981--15013
14
2.4
14
89
0
57
57
0
6
36
1.23
15730--15769
14
3.0
14
82
10
57
55
0
0
45
0.99
16507--16552
20
2.2
21
88
3
67
50
15
6
28
1.69
16699--16755
26
2.1
27
81
15
66
45
3
1
49
1.29
17459--17497
14
2.7
14
84
4
51
38
15
0
46
1.46

Tables:   1

The End!