Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008624.1 Corchorus capsularis cultivar CVL-1 contig08645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33788

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9104--9150
23
2.0
23
84
8
60
40
29
19
10
1.85
13362--13415
26
2.1
26
82
6
65
29
20
11
38
1.87
22044--22157
60
1.9
60
88
0
174
34
18
16
30
1.93
22204--22352
56
2.6
58
80
7
169
28
18
18
34
1.94
26156--26517
182
2.0
181
92
2
613
46
14
12
25
1.80
28369--28396
13
2.2
13
100
0
56
28
7
0
64
1.20
28463--28528
21
3.0
23
91
8
118
59
9
3
28
1.43
29932--29975
16
2.7
17
86
6
56
61
27
4
6
1.41
30068--30100
17
2.0
17
88
5
50
54
0
0
45
0.99
30836--30933
32
3.1
31
76
5
81
38
30
10
20
1.86
32867--32957
25
3.6
25
93
0
146
23
23
25
28
1.99

Tables:   1

The End!