Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008629.1 Corchorus capsularis cultivar CVL-1 contig08650, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3680

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1434--1573
22
6.3
22
79
9
131
32
8
19
39
1.82
1432--1573
68
2.1
66
83
5
169
32
8
19
39
1.82
1685--1971
22
12.9
22
69
17
125
40
9
14
35
1.78
1745--2016
22
12.4
22
71
15
165
42
9
13
34
1.76
2098--2144
19
2.4
20
89
7
78
44
10
19
25
1.82
2136--2411
22
12.8
21
70
13
132
41
8
13
36
1.75
2305--2429
22
5.6
23
78
3
94
38
7
13
40
1.72
2304--2428
45
2.8
43
79
11
119
38
7
14
40
1.73
2373--2458
22
3.9
22
80
6
93
38
11
12
37
1.80
2395--2453
23
2.6
22
82
10
66
40
11
8
38
1.72
2540--2603
19
3.3
19
89
6
85
43
9
21
25
1.82
2594--2869
22
12.8
21
68
13
114
40
9
13
36
1.77
2763--2888
22
5.6
23
78
5
84
38
7
13
39
1.74
2937--2992
22
2.5
22
82
2
67
30
12
19
37
1.89
3100--3153
22
2.5
22
87
0
72
40
9
11
38
1.73
2594--3153
44
12.9
43
69
11
209
38
9
14
37
1.78

Tables:   1

The End!