Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008630.1 Corchorus capsularis cultivar CVL-1 contig08651, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33642

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
367--441
40
2.0
35
85
14
98
16
14
16
53
1.74
3396--3447
2
26.0
2
96
0
95
50
1
0
48
1.12
10190--10222
13
2.5
13
90
0
57
69
0
9
21
1.15
12611--12672
27
2.3
27
91
0
97
41
40
0
17
1.50
12884--12982
49
2.0
49
86
0
135
37
21
14
27
1.92
25910--25939
1
30.0
1
100
0
60
100
0
0
0
0.00
29291--29329
2
19.5
2
89
0
60
51
5
0
43
1.24

Tables:   1

The End!