Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008631.1 Corchorus capsularis cultivar CVL-1 contig08652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58594

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3541--3637
31
3.1
32
81
8
112
29
16
12
41
1.85
5129--5375
83
3.0
83
95
1
433
41
14
20
24
1.89
6245--6285
20
1.9
21
85
14
57
24
2
9
63
1.37
16133--16165
17
1.9
18
88
11
52
3
12
0
84
0.72
19958--20015
28
2.1
28
100
0
116
46
10
20
22
1.81
26121--26166
22
2.1
21
84
4
56
2
30
0
67
1.03
28160--28186
12
2.2
12
100
0
54
29
0
18
51
1.46
39508--39549
3
14.0
3
100
0
84
33
0
0
66
0.92
40059--40089
2
15.5
2
100
0
62
48
0
0
51
1.00
44264--44330
25
2.6
25
95
2
116
53
13
8
23
1.68
45284--45318
2
17.5
2
100
0
70
51
0
0
48
1.00
50957--51058
33
3.1
33
84
2
125
16
39
32
11
1.85
50982--51033
16
3.2
16
73
10
52
17
44
28
9
1.80
58558--58594
2
19.0
2
94
5
67
51
0
0
48
1.00

Tables:   1

The End!