Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008647.1 Corchorus capsularis cultivar CVL-1 contig08668, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37671

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2109--2469
22
16.0
22
76
10
302
19
12
17
50
1.77
2222--2463
45
5.4
45
93
4
411
19
14
17
49
1.79
2538--2627
22
4.1
22
90
7
130
22
13
13
51
1.75
5938--6150
108
2.0
104
90
5
338
33
10
9
46
1.71
11588--11612
1
25.0
1
100
0
50
0
0
100
0
0.00
12466--12662
42
4.7
42
97
0
376
21
26
23
27
1.99
13509--13609
50
2.0
50
100
0
202
42
13
5
37
1.69

Tables:   1

The End!